{ "_id": "6a49959974ff1be5edd78a5f", "Package": "visae", "Type": "Package", "Title": "Visualization of Adverse Events", "Version": "0.2.1", "Authors@R": "c(person(\"Marcio A. Diniz\", \nrole = c(\"aut\", \"cre\",\"cph\"),\nemail = \"marcio.diniz@mountsinai.org\",\ncomment = c(ORCID = \"0000-0002-2427-7843\")),\nperson(\"Michael Luu\",\nrole = \"aut\",\nemail = \"michael.luu@cshs.org\",\ncomment = c(ORCID = \"0000-0002-7968-7313\")))", "Description": "Implementation of 'shiny' app to visualize adverse events\nbased on the Common Terminology Criteria for Adverse Events\n(CTCAE) using stacked correspondence analysis as described in\nDiniz et. al (2021).", "BugReports": "https://github.com/dnzmarcio/visae/issues", "License": "GPL(>= 2)", "Encoding": "UTF-8", "RoxygenNote": "7.3.1", "VignetteBuilder": "knitr", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev zlib1g-dev", "Repository": "https://dnzmarcio.r-universe.dev", "Date/Publication": "2025-03-03 21:45:50 UTC", "RemoteUrl": "https://github.com/dnzmarcio/visae", "RemoteRef": "HEAD", "RemoteSha": "6dd72539e2fefda61ee11bfa195196da5a359443", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-21 07:35:05 UTC", "User": "root" }, "Author": "Marcio A. Diniz [aut, cre, cph] (ORCID:\n),\nMichael Luu [aut] (ORCID: )", "Maintainer": "Marcio A. Diniz ", "_user": "dnzmarcio", "_type": "src", "_file": "visae_0.2.1.tar.gz", "_fileid": "https://r2.ropensci.org/30c78eb01b46673afef82d040b1ddd367f8b6464fe191506cc952f13b5183ff5", "_filesize": 881920, "_sha256": "30c78eb01b46673afef82d040b1ddd367f8b6464fe191506cc952f13b5183ff5", "_expires": "2026-10-12T23:22:00.000Z", "_created": "2026-06-21T07:35:05.000Z", "_published": "2026-07-04T23:22:01.716Z", "_jobs": [ { "job": 85175280282, "time": 167, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "ERROR", "artifact": "7773058782" }, { "job": 85175280289, "time": 124, "config": "linux-release-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "7773053410" }, { "job": 85175280178, "time": 70, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "7773045584" }, { "job": 85175280327, "time": 94, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "7773049164" }, { "job": 85175279990, "time": 157, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7773035172" }, { "job": 85175280228, "time": 118, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7773052557" }, { "job": 85175280342, "time": 78, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "7773046680" }, { "job": 85175280191, "time": 69, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "7773045564" }, { "job": 85175280316, "time": 60, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "7773044237" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402", "_status": "success", "_upstream": "https://github.com/dnzmarcio/visae", "_commit": { "id": "6dd72539e2fefda61ee11bfa195196da5a359443", "author": "Marcio Augusto Diniz ", "committer": "Marcio Augusto Diniz ", "message": "Replace magrittr pipe by native pipe\n", "time": 1741038350 }, "_maintainer": { "name": "Marcio A. Diniz", "email": "marcio.diniz@mountsinai.org", "orcid": "0000-0002-2427-7843" }, "_distro": "noble", "_registered": true, "_dependencies": [ { "package": "shiny", "version": ">= 1.4.0", "role": "Depends" }, { "package": "dplyr", "version": ">= 1.0.0", "role": "Depends" }, { "package": "ggplot2", "version": ">= 3.3.0", "role": "Depends" }, { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "shinyjs", "version": ">= 1.1", "role": "Imports" }, { "package": "ca", "version": ">= 0.71", "role": "Imports" }, { "package": "tidyr", "version": ">= 1.1.0", "role": "Imports" }, { "package": "ggrepel", "version": ">= 0.8.2", "role": "Imports" }, { "package": "rlang", "version": ">= 0.4.6", "role": "Imports" }, { "package": "DT", "version": ">= 0.13", "role": "Imports" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "dnzmarcio", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 1, "_contributors": [ { "user": "dnzmarcio", "count": 76, "uuid": 11599265 } ], "_userbio": { "uuid": 11599265, "type": "user", "name": "Marcio Augusto Diniz", "followers": 14, "description": "Ph.D. in Statistics. R Enthusiastic. Bayesian. " }, "_downloads": { "count": 254, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/visae" }, "_devurl": "https://github.com/dnzmarcio/visae", "_searchresults": 7, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "extra/visae.html", "manual.pdf" ], "_homeurl": "https://github.com/dnzmarcio/visae", "_realowner": "dnzmarcio", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2021-01-16" }, { "version": "0.2.0", "date": "2021-11-11" }, { "version": "0.2.1", "date": "2025-03-07" } ], "_exports": [ "ca_ae", "run_ca" ], "_help": [ { "page": "ca_ae", "title": "Correspondence Analysis of Adverse Events", "topics": [ "ca_ae" ] }, { "page": "run_ca", "title": "Shiny App for Correspondence Analysis of Adverse Events", "topics": [ "run_ca" ] } ], "_readme": "https://github.com/dnzmarcio/visae/raw/HEAD/README.md", "_rundeps": [ "base64enc", "bslib", "ca", "cachem", "cli", "commonmark", "cpp11", "crosstalk", "digest", "dplyr", "DT", "evaluate", "farver", "fastmap", "fontawesome", "fs", "generics", "ggplot2", "ggrepel", "glue", "gtable", "highr", "htmltools", "htmlwidgets", "httpuv", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "later", "lazyeval", "lifecycle", "magrittr", "memoise", "mime", "otel", "pillar", "pkgconfig", "promises", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "rlang", "rmarkdown", "S7", "sass", "scales", "shiny", "shinyjs", "sourcetools", "stringi", "stringr", "tibble", "tidyr", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "xtable", "yaml" ], "_vignettes": [ { "source": "ca_biplots.Rmd", "filename": "ca_biplots.html", "title": "Interpreting CA biplots", "engine": "knitr::rmarkdown", "headings": [ "Installation", "Stacked Correspondence Analysis", "Generating minimal dataset", "Investigating different CA configurations using the Shiny application", "Plotting CA biplot as ggplot object", "Interpreting biplots for Correspondence Analysis", "1. Minimum example dataset", "2. Interpreting percentage of explained variability by dimensions, center average treatment and AE dot sizes", "3. Interpreting dimensions and associations between treatments and AEs", "4. Comparing treatments and avoiding misleading interpretations", "References" ], "created": "2021-11-10 02:08:04", "modified": "2022-06-09 12:37:44", "commits": 5 } ], "_score": 3.6989700043360187, "_indexed": true, "_nocasepkg": "visae", "_universes": [ "dnzmarcio" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.2.1", "date": "2026-06-21T07:38:04.000Z", "distro": "noble", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/da771dd48cfa736597c693a3ec562bd9b1b33d54006927fddb4d56a47f9e11f4", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.6.0", "os": "linux", "version": "0.2.1", "date": "2026-06-21T07:37:22.000Z", "distro": "noble", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/5a6bbd245dfe9d8235d545edba204fa5751ae8aa3b30716acc304ca64c920437", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.5.3", "os": "mac", "version": "0.2.1", "date": "2026-06-21T07:36:30.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/bbe3db49e4f6b892a2098c309798e9ed6ec6e75be27b25acadb5a0a428116904", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.6.0", "os": "mac", "version": "0.2.1", "date": "2026-06-21T07:36:52.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/f66d4bf1549280700789b0a05838cdf58179926b8883e96d9a4f155b7c5ceb79", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.6.0", "os": "wasm", "version": "0.2.1", "date": "2026-06-21T07:37:21.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/2ddb1500c2e84b5c54a64852cc2356ae906f61b3532b08e71682548e36dc18cb", "status": "success", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.7.0", "os": "win", "version": "0.2.1", "date": "2026-06-21T07:36:33.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/fec18b81879e5aacc3d13f7ce963456566813a401a6cd5ca96817506258bdfd4", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.5.3", "os": "win", "version": "0.2.1", "date": "2026-06-21T07:36:25.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/c5c61b02905cf1e50d848e6b1822b5e1eabaf1215ec484afaf9d9cba92affff6", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" }, { "r": "4.6.0", "os": "win", "version": "0.2.1", "date": "2026-06-21T07:36:18.000Z", "commit": "6dd72539e2fefda61ee11bfa195196da5a359443", "fileid": "https://r2.ropensci.org/79e377f5c087da667efccbe9fe049c9de61da02766bf6a9b79bfeb85b3faab84", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/dnzmarcio/actions/runs/27897364402" } ] }